| Yinpterochiroptera | Pteropodidae | Pteropodinae Acerodon |
| Yinpterochiroptera | Pteropodidae | Pteropodinae Desmalopex |
| Yinpterochiroptera | Pteropodidae | Pteropodinae Eidolon |
| Yinpterochiroptera | Pteropodidae | Pteropodinae Mirimiri |
| Yinpterochiroptera | Pteropodidae | Pteropodinae Neopteryx |
| Yinpterochiroptera | Pteropodidae | Pteropodinae Pteralopex |
|  Yinpterochiroptera | Pteropodidae | Pteropodinae Pteropus |
| Yinpterochiroptera | Pteropodidae | Pteropodinae Styloctenium |
|  Yinpterochiroptera | Pteropodidae | Nyctimeninae Nyctimene |
| Yinpterochiroptera | Pteropodidae | Nyctimeninae Paranyctimene |
| Yinpterochiroptera | Pteropodidae | Cynopterinae Aethalops |
| Yinpterochiroptera | Pteropodidae | Cynopterinae Alionycteris |
| Yinpterochiroptera | Pteropodidae | Cynopterinae Balionycteris |
| Yinpterochiroptera | Pteropodidae | Cynopterinae Chironax |
|  Yinpterochiroptera | Pteropodidae | Cynopterinae Cynopterus |
| Yinpterochiroptera | Pteropodidae | Cynopterinae Dyacopterus |
| Yinpterochiroptera | Pteropodidae | Cynopterinae Haplonycteris |
| Yinpterochiroptera | Pteropodidae | Cynopterinae Latidens |
| Yinpterochiroptera | Pteropodidae | Cynopterinae Megaerops |
| Yinpterochiroptera | Pteropodidae | Cynopterinae Otopteropus |
| Yinpterochiroptera | Pteropodidae | Cynopterinae Penthetor |
| Yinpterochiroptera | Pteropodidae | Cynopterinae Ptenochirus |
| Yinpterochiroptera | Pteropodidae | Cynopterinae Sphaerias |
| Yinpterochiroptera | Pteropodidae | Cynopterinae Thoopterus |
| Yinpterochiroptera | Pteropodidae | Rousettinae Eonycteris |
|  Yinpterochiroptera | Pteropodidae | Rousettinae Rousettus |
| Yinpterochiroptera | Pteropodidae | Epomophorinae | Scotonycterini Casinycteris |
|  Yinpterochiroptera | Pteropodidae | Epomophorinae | Scotonycterini Scotonycteris |
|  Yinpterochiroptera | Pteropodidae | Epomophorinae | Epomophorini Epomophorus |
| Yinpterochiroptera | Pteropodidae | Epomophorinae | Epomophorini Epomops |
| Yinpterochiroptera | Pteropodidae | Epomophorinae | Epomophorini Hypsignathus |
| Yinpterochiroptera | Pteropodidae | Epomophorinae | Epomophorini Micropteropus |
| Yinpterochiroptera | Pteropodidae | Epomophorinae | Epomophorini Nanonycteris |
| Yinpterochiroptera | Pteropodidae | Epomophorinae | Plerotini Plerotes |
| Yinpterochiroptera | Pteropodidae | Epomophorinae | Myonycterini Lissonycteris |
| Yinpterochiroptera | Pteropodidae | Epomophorinae | Myonycterini Megaloglossus |
|  Yinpterochiroptera | Pteropodidae | Epomophorinae | Myonycterini Myonycteris |
| Yinpterochiroptera | Pteropodidae | Harpyionycterinae Aproteles |
| Yinpterochiroptera | Pteropodidae | Harpyionycterinae Dobsonia |
| Yinpterochiroptera | Pteropodidae | Harpyionycterinae Harpyionycteris |
|  Yinpterochiroptera | Pteropodidae | Macroglossinae Macroglossus |
| Yinpterochiroptera | Pteropodidae | Macroglossinae Melonycteris |
| Yinpterochiroptera | Pteropodidae | Macroglossinae Notopteris |
| Yinpterochiroptera | Pteropodidae | Macroglossinae Syconycteris |
|  Yinpterochiroptera | Rhinolophoidea | Rhinopomatidae Rhinopoma |
| Yinpterochiroptera | Rhinolophoidea | Megadermatidae Cardioderma |
| Yinpterochiroptera | Rhinolophoidea | Megadermatidae Lavia |
| Yinpterochiroptera | Rhinolophoidea | Megadermatidae Macroderma |
|  Yinpterochiroptera | Rhinolophoidea | Megadermatidae Megaderma |
| Yinpterochiroptera | Rhinolophoidea | Megadermatidae Eudiscoderma |
|  Yinpterochiroptera | Rhinolophoidea | Craseonycteridae Craseonycteris |
| Yinpterochiroptera | Rhinolophoidea | Rhinonycteridae †Cloeotis |
| Yinpterochiroptera | Rhinolophoidea | Rhinonycteridae †Brevipalatus |
| Yinpterochiroptera | Rhinolophoidea | Rhinonycteridae †Brachipposideros |
| Yinpterochiroptera | Rhinolophoidea | Rhinonycteridae †Paratriaenops |
| Yinpterochiroptera | Rhinolophoidea | Rhinonycteridae †Triaenops |
|  Yinpterochiroptera | Rhinolophoidea | Rhinonycteridae Rhinonicteris |
| Yinpterochiroptera | Rhinolophoidea | Hipposideridae †Palaeophyllophora |
| Yinpterochiroptera | Rhinolophoidea | Hipposideridae †Paraphyllophora |
| Yinpterochiroptera | Rhinolophoidea | Hipposideridae †Vaylatsia |
| Yinpterochiroptera | Rhinolophoidea | Hipposideridae †Archerops |
| Yinpterochiroptera | Rhinolophoidea | Hipposideridae †Miophyllorhina |
| Yinpterochiroptera | Rhinolophoidea | Hipposideridae †Riversleigha |
| Yinpterochiroptera | Rhinolophoidea | Hipposideridae †Xenorhinos |
| Yinpterochiroptera | Rhinolophoidea | Hipposideridae Anthops |
| Yinpterochiroptera | Rhinolophoidea | Hipposideridae Asellia |
| Yinpterochiroptera | Rhinolophoidea | Hipposideridae Aselliscus |
| Yinpterochiroptera | Rhinolophoidea | Hipposideridae Coelops |
|  Yinpterochiroptera | Rhinolophoidea | Hipposideridae Hipposideros |
| Yinpterochiroptera | Rhinolophoidea | Hipposideridae Macronycteris |
| Yinpterochiroptera | Rhinolophoidea | Rhinolophidae †Palaeonycteris |
|  Yinpterochiroptera | Rhinolophoidea | Rhinolophidae Rhinolophus |